Benjamin Buchfink, Chao Xie and Daniel Huson Fast and Sensitive Protein Alignment using DIAMOND
Raluca Uricaru, Guillaume Rizk, Vincent Lacroix, Elsa Quillery, Olivier Plantard, Rayan Chikhi, Claire Lemaitre and Pierre Peterlongo DiscoSnp: Reference-free detection of isolated SNPs
Nathanael Fillmore, Bo Li, Yongsheng Bai, Mike Collins, James A. Thompson, Ron Stewart and Colin N. Dewey Evaluation of de novo transcriptome assemblies from RNA-Seq data
Faraz Hach, Ibrahim Numanagic and S. Cenk Sahinalp DeeZ: reference-based compression by local assembly
Short Talks
Alessandro Mammana and Ho-Ryun Chung, Chromatin segmentation with a joint model for reads explains a larger portion of the epigenome
Aaron Lun and Gordon Smyth Using csaw to detect differentially bound regions in ChIP-seq data
Norbert Dojer, Abhishek Mitra, Yea-Lih Lin, Anna Kubicka, Magdalena Skrzypczak, Krzysztof Ginalski, Philippe Pasero and Maga Rowicka Computational detection of DNA double-stranded breaks and inferring mechanisms of their formation
David Seifert, Francesca Di Giallonardo, Karin J. Metzner, Huldrych F. Günthard and Niko Beerenwinkel A Framework for Inferring Fitness Landscapes of Patient-Derived Viruses Using Quasispecies Theory
Damian Wójtowicz, Fedor Kouzine, Arito Yamane, Craig J. Benham, Rafael C. Casellas, David Levens and Teresa M. Przytycka Genome-wide Mapping and computational analysis of non-B DNA structures in vivo
Posters
Aleksandra Swiercz, Dorota Kowalczywiewicz, Luiza Handschuh, Katarzyna Lesniak, Marek Figlerowicz and Jan Wrzesinski Deep sequencing characterization of Sus scrofa piRNA fraction shared between female and male gonads
Michał Kierzynka, Wojciech Frohmberg, Jacek Błażewicz, Piotr Żurkowski, Marta Kasprzak and Paweł Wojciechowski GPU-accelerated whole genome assembly
Shaun Jackman, Karthika Raghavan, Benjamin Vandervalk, Daniel Paulino, Justin Chu, Hamid Mohamadi, Anthony Raymond, Rene Warren and Inanc Birol Scaling ABySS to longer reads using spaced k-mers and Bloom filters
Samuel K. Handelman, Michal Seweryn, Ryan M. Smith, Katherine Hartmann, Danxin Wang, Maciej Pietrzak, Andrew D. Johnson, Andrzej Kloczkowski, Wolfgang Sadee Conditional Entropy in Variation-Adjusted Windows Detects Positive Selection Signatures Relevant to Next Generation Sequencing
